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4
votes
2
answers
84
views
2
answers
Speed efficient way to select the n-th element from GRangsList
iranges genomicranges R written 1 day ago by foehn • 10
3
votes
3
answers
3.0k
views
3
answers
Non overlapping granges (or opposite of subsetByOverlaps)
iranges genomicranges granges subsetbyoverlaps written 3.2 years ago by vinod.acear • 30 • updated 12 days ago by doublehelix31 • 0
2
votes
1
answer
81
views
1
answer
Bug in follow and precede
iranges genomicranges software error written 27 days ago by Luukperdaems • 0 • updated 15 days ago by Valerie Obenchain ♦♦ 6.7k
0
votes
0
answers
89
views
0
answers
GenomicRanges based on indices or more conditions, and add column from match
iranges genomicranges findoverlaps written 9 weeks ago by francesca casalino • 50
2
votes
1
answer
147
views
1
answer
Gaia results including negative widths
iranges genomicranges gaia written 4 months ago by Talip Zengin • 10 • updated 4 months ago by Sandro Morganella • 30
0
votes
1
answer
106
views
1
answer
IRanges seqselect and subsetByRanges
iranges defunct written 4 months ago by joseluis.ruiz • 0 • updated 4 months ago by Michael Lawrence ♦ 10k
0
votes
3
answers
258
views
3
answers
Looking for the source for IRanges 2.8.1, S4Vectors 0.12.1 and XVector 0.14.0
iranges xvector s4vectors bioconductor r 3.3.2 written 4 months ago by chokoiboko • 0 • updated 4 months ago by becker.gabriel • 0
0
votes
0
answers
100
views
0
answers
IRanges error while input rsem data into ballgown : .Call2("solve_user_SEW0", start, end, width, PACKAGE = "IRanges")
iranges ballgown rsem written 5 months ago by kicheol.kim • 0
1
vote
0
answers
190
views
0
answers
IRanges error while input rsem data into ballgown : .Call2("solve_user_SEW0", start, end, width, PACKAGE = "IRanges")
iranges ballgown rsem written 5 months ago by kicheol.kim • 0
0
votes
1
answer
165
views
1
answer
TEQC - new version Bioc - problem with IRanges
iranges teqc written 6 months ago by msourdeix • 0 • updated 5 months ago by m.hummel • 10
0
votes
0
answers
91
views
0
answers
Avoid rotating vector when doing arithmetic on different length IRanges RleList entries
iranges s4vectors rle rlelist written 5 months ago by endrebak85 • 30
2
votes
1
answer
202
views
1
answer
IRanges which are not S4 generic: endoapply mendoapply error in loading oligoclasses
oligoclasses iranges biocgenerics written 6 months ago by GENOMIC_region • 0
0
votes
0
answers
113
views
0
answers
CNRegions gives error in IRanges Package
iranges cnregions iclusterplus written 6 months ago by sumonaray55 • 0
0
votes
1
answer
141
views
1
answer
VariantAnnotation::locateVariants error coming from XVector
variantannotation iranges xvector written 6 months ago by Vivek.b • 90
2
votes
2
answers
306
views
2
answers
unlist doesn't work for IRanges
iranges written 7 months ago by li lilingdu • 450 • updated 7 months ago by James W. MacDonald ♦ 48k
1
vote
1
answer
199
views
1
answer
Detecting Overlaps within Grange Object
iranges granges R grange written 8 months ago by g.k • 0 • updated 8 months ago by Michael Lawrence ♦ 10k
0
votes
3
answers
199
views
3
answers
HiTC importC not working
iranges hitc windows debian written 9 months ago by René Wiegandt • 0 • updated 9 months ago by Nicolas Servant • 230
0
votes
1
answer
300
views
1
answer
Error in .Primitive("c")(<S4 object of class "IRanges">) : could not find symbol "recursive" in environment of the generic function running msa
iranges msa written 11 months ago by mtorresp1975 • 0 • updated 11 months ago by UBodenhofer • 250
0
votes
1
answer
236
views
1
answer
Error in export ifelse from IRanges
iranges export package ifelse namespace written 11 months ago by dalibor.miklik • 0 • updated 11 months ago by James W. MacDonald ♦ 48k
2
votes
1
answer
270
views
1
answer
Packages employing RangedSummarizedExperiment objects
iranges granges packages rangedsummarizedexperiment written 11 months ago by rbronste • 60 • updated 11 months ago by Aaron Lun • 21k
1
vote
2
answers
942
views
2
answers
biocLite updating problem with Ubuntu 17.10
annotationdbi iranges biocgenerics s4vectors ubuntu written 12 months ago by KRA • 0 • updated 12 months ago by Martin Morgan ♦♦ 22k
0
votes
0
answers
253
views
0
answers
Rcpp adding circular ranges to GRanges object in c++
iranges granges rcpp circular written 12 months ago by hauken_heyken • 40
4
votes
2
answers
707
views
2
answers
How to construct a valid GRanges object from RCPP and pass back to R
iranges granges rcpp constructor written 15 months ago by hauken_heyken • 40 • updated 13 months ago by fedor.bezrukov • 10
0
votes
0
answers
282
views
0
answers
resize functions causes an error - "could not find function "unsafe.update"
iranges genomicranges resize written 14 months ago by Assa Yeroslaviz • 1.4k
6
votes
2
answers
640
views
2
answers
BiocGenerics built with R 3.4.2 changes behaviour
variantannotation iranges biocgenerics written 14 months ago by ginggs • 30 • updated 14 months ago by Hervé Pagès ♦♦ 13k
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