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4
votes
2
answers
84
views
2
answers
Speed efficient way to select the n-th element from GRangsList
iranges genomicranges R written 1 day ago by foehn • 10
0
votes
0
answers
67
views
0
answers
Recommendation for visualizing ChIP-qPCR data?
ggbio R chip-seq histone chip-seq written 7 days ago by Ramiro Magno • 100
1
vote
0
answers
65
views
0
answers
Fisher test in Rna seq
rnaseq R rna-seq written 9 days ago by g.k • 0
2
votes
1
answer
48
views
1
answer
plotPlatePosition and plate_position
R scater singlecellexperiment written 10 days ago by TJ • 0 • updated 9 days ago by Aaron Lun • 21k
0
votes
1
answer
70
views
1
answer
Problem installing scater
R bioconductor scater biocmanager written 13 days ago by hfberg • 0 • updated 12 days ago by Aaron Lun • 21k
2
votes
0
answers
62
views
0
answers
make TxDb from list of genes
R ensembl rstudio maketxdbfrombiomart maketxdbfromgranges written 13 days ago by rtwest • 0
0
votes
1
answer
105
views
1
answer
Controlling numerical covariates: differential gene expression with limma voom
rnaseq limma R voom differential gene expression written 16 days ago by Onyi Ukay • 0 • updated 16 days ago by mikhael.manurung • 10
0
votes
1
answer
93
views
1
answer
Installing lpsymphony on Mac OS X
R mac os x lpsymphony written 23 days ago by tohsumi • 0 • updated 18 days ago by Wolfgang Huber ♦ 13k
0
votes
0
answers
73
views
0
answers
Rsubread installation failed
R package installation written 20 days ago by justinkablan225 • 0
0
votes
1
answer
66
views
1
answer
Pick coding vs non-coding from Ensembl data set
R ensembl protein coding noncoding rna ensembldb written 21 days ago by jdmentze • 0 • updated 21 days ago by Johannes Rainer • 1.3k
1
vote
1
answer
81
views
1
answer
Biomart cannot get multiple genes?
biomart R written 21 days ago by Mike • 10
1
vote
2
answers
112
views
2
answers
RNA-seq analysis using R
rnaseq limma convert R written 21 days ago by justinkablan225 • 0 • updated 21 days ago by Gordon Smyth ♦ 35k
0
votes
0
answers
56
views
0
answers
Rhdf5lib install problems
rhdf5 R bioconductor biocmanager 3.5 written 26 days ago by cem45 • 0
0
votes
1
answer
57
views
1
answer
Timeout was reached error in GEOquery package
microarray software error R written 27 days ago by morteza.hadizade • 10 • updated 27 days ago by Kevin Blighe • 30
0
votes
1
answer
117
views
1
answer
Please help with workspace error in R
R test fisher exact workspace written 4 weeks ago by Sara • 0 • updated 4 weeks ago by Aaron Lun • 21k
0
votes
0
answers
137
views
0
answers
Remove NaN from a list or replace NaN with a value.
R meta-analysis written 4 weeks ago by morteza.hadizade • 10
8
votes
1
answer
129
views
1
answer
maintainer option for bioconductor packages
R bioconductor written 5 weeks ago by FDG • 70 • updated 5 weeks ago by James W. MacDonald ♦ 48k
1
vote
0
answers
117
views
0
answers
makeTxDbFromUCSC: error in Make the TxDb object
genomicfeatures R maketxdbfromucsc written 6 weeks ago by DMA1 • 10
3
votes
1
answer
134
views
1
answer
biomaRt question (missing gene information?)
biomart R written 7 weeks ago by Mike • 10 • updated 7 weeks ago by Mike Smith • 3.2k
0
votes
0
answers
108
views
0
answers
mitochodria isCircular equals to FALSE in EnsDb.Hsapiens.v86 and EnsDb.Mmusculus.v79
annotation R ensembldb written 7 weeks ago by foehn • 10
0
votes
0
answers
566
views
0
answers
Job: Biostatistics/Bioinformatics Research Scientist
genetics job statistics R ngs genomics written 5 months ago by Luo Weijun • 1.4k
0
votes
0
answers
96
views
0
answers
Keep getting NaN Values in GAGE analysis of KEGG pathways
gage deseq2 R kegg nan written 7 weeks ago by owen.donohoe • 0
1
vote
1
answer
98
views
1
answer
Dispersion & FDR in edgeR
edger R written 8 weeks ago by Lisa • 0 • updated 8 weeks ago by Aaron Lun • 21k
2
votes
1
answer
128
views
1
answer
Error in windows() function
windows software error R written 8 weeks ago by a • 0 • updated 8 weeks ago by Mike Smith • 3.2k
7
votes
1
answer
119
views
1
answer
Using GenomicDataCommons R package to identify cases with both DNA methylation and gene expression data
R rna-seq dna methylation gdc written 8 weeks ago by RichardJActon • 30 • updated 8 weeks ago by Sean Davis ♦ 21k
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