Bioconductor

@Bioconductor

Roswell Park Cancer Institute
bioconductor.org
Inscrit en novembre 2011
18 Photos et vidéos Photos et vidéos

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  1. 12 déc.

    Bioconductor pkgs are just R pkgs; they don't have any special properties. The issue comes from GOSemSim::load_OrgDb, which says `require(...)`, attaching the org.db & other pkgs to the search path; this is definitely poor form, but does not cause an R CMD check warning.

    En réponse à @David_McGaughey @Bioconductor
    Another issue is that even if I load `clusterProfiler::bitr` this function still loads AnnotationDbi into the namespace….is that allowed behavior for libraries?
    1 réponse 1 Retweet 2 j'aime
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  2. 12 déc.

    Use them fully resolved `AnnotationDbi::select()` / `dplyr::select()` or use the conflicted package to die earlier.

    Isn’t there someway to handle and each REALLY wanting `select` ? This issue keeps murdering my scripts/r notebooks.
    2 réponses 2 Retweets 7 j'aime
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  3. a retweeté
    7 déc.

    We're hiring! Want to help develop the platform? Check out our Research Scientist position with .

    9 Retweets 6 j'aime
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  4. a retweeté
    6 déc.

    Registration for in NYC is now open, and several invited speakers announced (, , , , Lihua Julie Zhu). Travel scholarships available. FYI to all at ...

    1 réponse 33 Retweets 31 j'aime
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  5. 30 nov.

    really good & compassionate advice

    Since we're running a bit short of time at we'll skip my talk, but here are my slides on 'Getting help and helping others (including future you)' when using &
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    8 Retweets 13 j'aime
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  6. a retweeté
    26 nov.

    Registration now open for the EMBL Course: Introduction to Bioinformatics with R and Bioconductor, a beginner level course that provides a basic training in generic statistical bioinformatics data analysis, 1 - 4 Apr

    3 Retweets 8 j'aime
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  7. a retweeté
    20 nov.

    My group is hiring a software engineer talented in and familiar with . We're committed to and science.

    1 réponse 58 Retweets 62 j'aime
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  8. a retweeté
    9 nov.

    Some recent development branch updates to the package allow both piping (%>%) and formula-free (no ~) filtering exposing the metadata like to -like filtering (and select).

    3 réponses 16 Retweets 29 j'aime
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  9. a retweeté
    8 nov.

    The software list is up at A tweet with hashtag and the CRAN, GitHub, BitBucket, or Bioconductor URL will get your software added. Thanks to for helping set this up last year for the meeting.

    13 réponses 72 Retweets 132 j'aime
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  10. 6 nov.

    / Software ecosystem architect position, Dana Farber Cancer Institute

    7 Retweets 2 j'aime
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  11. 31 oct.

    Trick or Treat?! Bioc 3.8 is now available!

    28 Retweets 48 j'aime
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  12. a retweeté
    23 oct.

    I'm looking for a Research software engineer/bioinformatician to work on and omics.

    33 Retweets 22 j'aime
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  13. a retweeté
    17 oct.

    Our approach to producing Workshop compendium for , coordinating 17 authors, 15 contributions to produce 388 page book and matching computational resources in 10 weeks.

    2 réponses 19 Retweets 44 j'aime
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  14. a retweeté
    15 oct.

    Just finished to prepare 2 courses: 1) core packages for data analysis 2) and data analysis See Will teach them in the next 2 days M2 bioinfo

    6 Retweets 24 j'aime
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  15. a retweeté
    15 oct.

    Our team will work to make the data and compute resources in the AnVIL available to as wide a community of researchers as possible. Drawing on our experience implementing and we will build a variety of entry points to the AnVIL for different users...

    1 réponse 3 Retweets 6 j'aime
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  16. a retweeté
    16 oct.

    Awesome use of 's Tabula Muris data - a package to load the data! Thanks !!

    1 réponse 10 Retweets 22 j'aime
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  17. a retweeté
    12 oct.

    We're hiring! Want to help develop the platform? Check out our Research Scientist position with .

    1 réponse 22 Retweets 17 j'aime
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  18. a retweeté
    4 sept.

    Registration is now open for European Developer meeting Dec 6-7 at TUM in Munich. Featuring , , Bernd Bischl and more .. Abstract deadline: Oct 10 Details:

    21 Retweets 20 j'aime
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  19. a retweeté
    20 août

    Our group is hiring a Bioinformatics Analyst. Live in , work on , , and cutting edge CAR T cell and research.

    1 réponse 23 Retweets 21 j'aime
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  20. a retweeté
    29 juil.

    Please RT: We are hiring a (min. 2 year) postdoc. Live in Zurich! Analyze single-cell data of various flavours .. develop (and benchmark) statistical / computational tools! Details to follow soon.

    5 réponses 215 Retweets 112 j'aime
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