Bioconductor

@Bioconductor

Roswell Park Cancer Institute
bioconductor.org
Sumali noong Nobyembre 2011
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  1. Dis 12

    Bioconductor pkgs are just R pkgs; they don't have any special properties. The issue comes from GOSemSim::load_OrgDb, which says `require(...)`, attaching the org.db & other pkgs to the search path; this is definitely poor form, but does not cause an R CMD check warning.

    Sumasagot kina @David_McGaughey @Bioconductor
    Another issue is that even if I load `clusterProfiler::bitr` this function still loads AnnotationDbi into the namespace….is that allowed behavior for libraries?
    1 sagot 1 retweet 2 gusto
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  2. Dis 12

    Use them fully resolved `AnnotationDbi::select()` / `dplyr::select()` or use the conflicted package to die earlier.

    Isn’t there someway to handle and each REALLY wanting `select` ? This issue keeps murdering my scripts/r notebooks.
    2 sagot 2 retweet 7 gusto
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    Dis 7

    We're hiring! Want to help develop the platform? Check out our Research Scientist position with .

    9 mga retweet 6 (na) gusto
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    Dis 6

    Registration for in NYC is now open, and several invited speakers announced (, , , , Lihua Julie Zhu). Travel scholarships available. FYI to all at ...

    1 sagot 33 retweet 31 gusto
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  5. Nob 30

    really good & compassionate advice

    Since we're running a bit short of time at we'll skip my talk, but here are my slides on 'Getting help and helping others (including future you)' when using &
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    8 retweet 13 gusto
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    Nob 26

    Registration now open for the EMBL Course: Introduction to Bioinformatics with R and Bioconductor, a beginner level course that provides a basic training in generic statistical bioinformatics data analysis, 1 - 4 Apr

    3 retweet 8 gusto
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    Nob 20

    My group is hiring a software engineer talented in and familiar with . We're committed to and science.

    1 sagot 58 retweet 62 gusto
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  8. Ni-retweet ni
    Nob 9

    Some recent development branch updates to the package allow both piping (%>%) and formula-free (no ~) filtering exposing the metadata like to -like filtering (and select).

    3 sagot 16 mga retweet 29 (na) gusto
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    Nob 8

    The software list is up at A tweet with hashtag and the CRAN, GitHub, BitBucket, or Bioconductor URL will get your software added. Thanks to for helping set this up last year for the meeting.

    13 sagot 72 retweet 132 gusto
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  10. Nob 6

    / Software ecosystem architect position, Dana Farber Cancer Institute

    7 retweet 2 gusto
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  11. Okt 31

    Trick or Treat?! Bioc 3.8 is now available!

    28 retweet 48 gusto
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  12. Ni-retweet ni
    Okt 23

    I'm looking for a Research software engineer/bioinformatician to work on and omics.

    33 retweet 22 gusto
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  13. Ni-retweet ni
    Okt 17

    Our approach to producing Workshop compendium for , coordinating 17 authors, 15 contributions to produce 388 page book and matching computational resources in 10 weeks.

    2 sagot 19 mga retweet 44 (na) gusto
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    Okt 15

    Just finished to prepare 2 courses: 1) core packages for data analysis 2) and data analysis See Will teach them in the next 2 days M2 bioinfo

    6 mga retweet 24 (na) gusto
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    Okt 15

    Our team will work to make the data and compute resources in the AnVIL available to as wide a community of researchers as possible. Drawing on our experience implementing and we will build a variety of entry points to the AnVIL for different users...

    1 sagot 3 retweet 6 (na) gusto
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    Okt 16

    Awesome use of 's Tabula Muris data - a package to load the data! Thanks !!

    1 sagot 10 retweet 22 gusto
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    Okt 12

    We're hiring! Want to help develop the platform? Check out our Research Scientist position with .

    1 sagot 22 retweet 17 gusto
    I-undo
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    Set 4

    Registration is now open for European Developer meeting Dec 6-7 at TUM in Munich. Featuring , , Bernd Bischl and more .. Abstract deadline: Oct 10 Details:

    21 retweet 20 gusto
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    Ago 20

    Our group is hiring a Bioinformatics Analyst. Live in , work on , , and cutting edge CAR T cell and research.

    1 sagot 23 retweet 21 gusto
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    Hul 29

    Please RT: We are hiring a (min. 2 year) postdoc. Live in Zurich! Analyze single-cell data of various flavours .. develop (and benchmark) statistical / computational tools! Details to follow soon.

    5 sagot 215 retweet 112 gusto
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