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1
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2
answers
113
views
2
answers
RNA-seq analysis using R
rnaseq limma convert R written 21 days ago by justinkablan225 • 0 • updated 21 days ago by Gordon Smyth ♦ 35k
0
votes
2
answers
1.4k
views
2
answers
convert affy CEL files to data.frame??
convert written 7.9 years ago by D M • 40 • updated 3 months ago by giulio.genovese • 0
1
vote
1
answer
399
views
1
answer
How to convert Illumina HT_12_v4 annotation
microarray annotation convert R illumina human ht-12 v4 written 12 months ago by p_donchev84 • 0 • updated 12 months ago by thokall • 120
1
vote
1
answer
649
views
1
answer
Can XCMS output continuum/profile data to netCDF format?
convert xcms protein written 2.0 years ago by ray.bacala • 0 • updated 2.0 years ago by Johannes Rainer • 1.3k
1
vote
1
answer
494
views
1
answer
To convert MAList to ExpressionSet using R package 'convert'
convert written 2.1 years ago by rheupion • 0 • updated 2.1 years ago by Gordon Smyth ♦ 35k
0
votes
4
answers
3.2k
views
4
answers
How to reverse translate amino acid sequence into mammalian codon optimised cDNA
convert translation written 4.1 years ago by tomas.bjorklund • 20 • updated 2.1 years ago by caroline • 0
1
vote
0
answers
454
views
0
answers
converting amino-acid one letter code into cDNA sequene
convert aminoacid-onlettercode cdna written 2.5 years ago by arvind90.psc • 0
1
vote
2
answers
994
views
2
answers
making ExpressionSet from RGList via NChannelSet for use with 'sva'
biobase convert ringo arrayqualitymetrics sva written 2.8 years ago by chris.rock • 0 • updated 2.8 years ago by Gordon Smyth ♦ 35k
1
vote
2
answers
1.8k
views
2
answers
minfi, bumphunter + complex experimental design, and 3 other 450K queries
go convert minfi bumphunter written 4.6 years ago by Guido Hooiveld • 2.3k • updated 2.9 years ago by david.watson • 10
1
vote
1
answer
687
views
1
answer
Error of GDS2eSet() function
convert geoquery error gds2eset written 3.0 years ago by vahideh • 0 • updated 3.0 years ago by James W. MacDonald ♦ 48k
0
votes
2
answers
899
views
2
answers
Minfi "mapToGenome" error when attempting to generate a genomicRatioSet
cancer convert minfi written 4.8 years ago by Kasper Daniel Hansen ♦ 6.4k • updated 3.1 years ago by diana0690 • 0
0
votes
0
answers
531
views
0
answers
How to convert codominant Microsatellite two column data into illumina AB format?
convert microsatellite recode written 3.2 years ago by parka • 0
0
votes
1
answer
5.2k
views
1
answer
How to combine expression values of multiple probes for one gene
geneexpression probe convert onechannelgui written 3.4 years ago by ayanava18 • 10 • updated 3.4 years ago by svlachavas • 630
6
votes
1
answer
1.6k
views
5 follow
1
answer
[ReportingTools] HTMLReport of DESeq2 results using Ensembl Gene Ids
sequencing annotation convert biomart reportingtools deseq2 written 5.0 years ago by Jason Hackney • 160 • updated 3.9 years ago by andrew.j.skelton73 • 310
3
votes
4
answers
908
views
4
answers
Metagenomic analysis: Aligning ChIPseq data on TSS
chipseq metagenomics convert biomart shortread written 4.3 years ago by patrick.schordert • 20
0
votes
1
answer
896
views
1
answer
Converting .gpr files to .csv files
microarray go convert written 4.3 years ago by Guest User • 12k • updated 4.3 years ago by James W. MacDonald ♦ 48k
0
votes
1
answer
1.2k
views
1
answer
Motif enrichment analysis: Error in transfac format and background frequencies from BSGenome
bsgenome convert pwmenrich motifdb written 4.3 years ago by deepti anand • 50 • updated 4.3 years ago by Robert Stojnic • 80
0
votes
0
answers
627
views
0
answers
ChIPpeakAnno
snp annotation annotate convert written 4.3 years ago by Julie Zhu • 3.9k
0
votes
1
answer
887
views
1
answer
narrow and xstringset
convert written 4.4 years ago by carol white • 680 • updated 4.4 years ago by Valerie Obenchain ♦♦ 6.7k
0
votes
1
answer
1.4k
views
1
answer
Biomart annotation
annotate convert written 4.4 years ago by [email protected] • 40 • updated 4.4 years ago by John Blischak • 150
0
votes
1
answer
768
views
1
answer
ShortReadQ and conversion of quality scores to characters
convert written 4.4 years ago by Ivan Gregoretti • 310 • updated 4.4 years ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
1.0k
views
1
answer
SomaticSignatures
annotation cancer convert written 4.5 years ago by Huma Asif • 90 • updated 4.5 years ago by Julian Gehring • 1.3k
0
votes
2
answers
1.4k
views
2
answers
converting probeset id to gene id's : fRMA
probe affy convert frma written 4.5 years ago by Abhishek Pratap • 170 • updated 4.5 years ago by Peter Langfelder • 1.6k
0
votes
1
answer
553
views
1
answer
Approaches to building Rle sequences from ranges
go convert written 4.5 years ago by Vince S. Buffalo • 40 • updated 4.5 years ago by Jeff Johnston • 90
0
votes
2
answers
1.1k
views
2
answers
GRanges - coercion from dataframe
convert written 4.6 years ago by Ghost • 10 • updated 4.5 years ago by Michael Lawrence ♦ 10k
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