support for genetics and pharmacogenetics #6

Closed
twamarc opened this Issue Jun 24, 2015 · 3 comments

1 participant

@twamarc
Owner

Picked from Mark Woon:
https://lists.w3.org/Archives/Public/public-schemed/2015Jun/0004.html

Hi,
I'd would love to see support for genetics and pharmacogenetics in the
healthcare schema.
For example, there is no way to even provide metadata for genetics-based
dosing guidelines in MedicalGuideline right now. An example of such a
guideline can be found here: https://www.pharmgkb.org/guideline/PA166104997
I would like to propose the addition of these types:

  • MedicalEntity
    • GeneticSequence
      • Gene
      • Genome
      • Variant
      • VariantCollection
        • Diplotype
        • Haplotype
        • Genotype The VariantCollection level is not really necessary, but all it's children contains a collection of Variants. I can go into more detail on exactly what I think these types should be/contain, but wanted to make sure there's consensus on the types that should be added. Thanks, -Mark woon
@ghost

+1
However it's hard here to review or comment. Should help if we have a full .rdfa file (or .ttl) of this so we can review the full model (hierarchy, subClassOf, range/domain, etc). This may help also to integrate it to the existing extension.

@twamarc: can this be communicated as a guide to everyone wishing to add some stuffs to the #healthSchemaOrg extension proposal?

@twamarc
Owner

Sure! I will set this on list of requirements.
@markwoon Can you provide a full .rdfa file (or .ttl) from this structure so we can review the full model (hierarchy, subClassOf, range/domain, etc)?

@twamarc
Owner

Closed!
To be continued here: schemaorg/schemaorg#1116

@twamarc twamarc closed this Jun 11, 2016
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