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Sam Minot
@
sminot
Seattle, WA
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Scientist with a long-time passion for microbial genomics and the microbiome
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4,048
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955
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1,586
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Sam Minot
@sminot
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8 ಗಂ. |
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And in more depth, I'm pretty happy with how well Cromwell handles call caching, which is ultimately much better for reproducibility than using a file-system based dependency system, but can be highly unintuitive for us old timer bioinformaticians
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Sam Minot
@sminot
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9 ಗಂ. |
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What's the biggest microbiome metagenomics experiment right now? Is it TEDDY? Anything of comparable size that isn't behind dbgap? #bioinformatics #scienceparasite #fortheloveofthephage #datadatadata
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| Sam Minot ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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Geof Hannigan
@iprophage
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22 ಗಂ. |
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I’m very excited to present my first preprint in industry and the first from our Center! This collaborative work was a lot of fun and turned out pretty cool! Check it out, especially if you are into the #microbiome and BGCs! 😁 #science @biorxivpreprint twitter.com/biorxivpreprin…
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| Sam Minot ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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Mick Watson
@BioMickWatson
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ಡಿಸೆಂ 18 |
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Bioinformatician looking to contribute to lots of different projects? Come and work with us! @roslininstitute
ed.ac.uk/roslin/working…
Please RT
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| Sam Minot ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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PopGenGoogling
@popgengoogling
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ಡಿಸೆಂ 18 |
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what do PC3 and PC4 look like though
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| Sam Minot ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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Carly Strasser
@carlystrasser
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ಡಿಸೆಂ 18 |
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Comp Bio #Postdoc fellowship at @fredhutch - would <3 to see diverse pool of candidates!! fredhutch.org/en/labs/phs/pr…
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| Sam Minot ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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Raphael Gottardo 🇫🇷⭐⭐
@raphg
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ಡಿಸೆಂ 19 |
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Me too!
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| Sam Minot ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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Jamie Kinney
@jamiekinney
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ಡಿಸೆಂ 19 |
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Congratulations!!! I've been looking forward to this announcement 👏🍾 twitter.com/nextflowio/sta…
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| Sam Minot ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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Gavin Ha
@GavinHa
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ಡಿಸೆಂ 17 |
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My lab is looking for a talented #bioinformatics analyst to work on exciting projects in circulating tumor DNA and #cancergenomics. Incredible opportunity to join a world-leading cancer research institute @fredhutch. GavinHaLab.org
linkedin.com/jobs/view/bioi…
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Sam Minot
@sminot
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ಡಿಸೆಂ 18 |
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I’m actually pretty impressed with it!
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| Sam Minot ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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SciEdHutch
@SciEdHutch
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ಡಿಸೆಂ 17 |
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Help us spread the word: Open House for #NativeAmerican students & their families Jan. 23 at @fredhutch. We will provide dinner (#indigenous catering), an overview of our science ed programs for HS and college students, and a tour! RSVP by Jan. 17 to: bit.ly/hutch_012319 pic.twitter.com/dx8JAlfvDc
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| Sam Minot ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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Jonathan Jacobs
@bioinformer
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ಡಿಸೆಂ 17 |
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#Microbiome characterization by high-throughput transfer RNA sequencing and modification analysis | @NatureComms Communications buff.ly/2EsHDQk #bioinformatics #genomics #tRNA pic.twitter.com/ZK16TtD7go
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Sam Minot
@sminot
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ಡಿಸೆಂ 17 |
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Turns out the trick is to spell "enabled" as "enabled", not "elabled" :-)
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| Sam Minot ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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Albert Vilella
@AlbertVilella
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ಡಿಸೆಂ 15 |
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I like the title: "The rise of the machines". For a list of #Bioinformatics #workflow #managers and other tools, find bit.ly/biowl with @github metrics and poll votes
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| Sam Minot ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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Geof Hannigan
@iprophage
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ಡಿಸೆಂ 17 |
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New blog post is up! Reflecting on our recent publication on colorectal cancer and the gut virome. Check it out for a quick read. :) #science #microbiome #coloncancer microbiology.github.io/blog/recent-cr…
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Sam Minot
@sminot
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ಡಿಸೆಂ 14 |
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Does anyone know particular tricks to get call caching to work in Cromwell? I've got a local DB set up, and I'm referencing my Docker images by sha256, but it doesn't seem to work for me. Any other gottchas?
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Sam Minot
@sminot
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ಡಿಸೆಂ 13 |
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That’s the thrill that lets you know you’re alive
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Sam Minot
@sminot
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ಡಿಸೆಂ 13 |
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Any comment on this @JacobShiach ? twitter.com/Microbiome_Art…
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Sam Minot
@sminot
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ಡಿಸೆಂ 13 |
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Raise your hand if you knew that GATK had tools for metagenomics
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Sam Minot
@sminot
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ಡಿಸೆಂ 13 |
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And in my next software update, I will change all of the input flags to uppercase
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