Adam Phillippy

@aphillippy

Genome informatics for the advancement of global health. Open science, source, data. Investigator at NIH/NHGRI. Tweets are my own.

Maryland
genomeinformatics.github.io
Beigetreten Juni 2009
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Tweets

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  1. hat retweetet
    vor 14 Stunden

    Thank you for the editorial article on our : 'The is the clearest indicator yet that the era of high-quality reference genomes is upon us.'

    Editorial: The Vertebrate Genome Project () provides a new benchmark for those seeking to build reference genomes
    1 Antwort 16 Retweets 23 Gefällt mir
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  2. hat retweetet
    vor 21 Stunden

    A High-Quality De Novo Genome Assembly from a Single Mosquito using PacBio Sequencing

    3 Antworten 39 Retweets 54 Gefällt mir
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  3. hat retweetet
    17. Dez.

    It's out! Check out my first first author paper "Long-read sequence and assembly of segmental duplications" out today at ()! Many thanks to everyone who made it happen: Philip Dishuck, Tonia Brown, , , and more!

    1 Antwort 66 Retweets 129 Gefällt mir
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  4. hat retweetet
    17. Dez.

    The call for proceedings papers for HitSeq 2019 is out!

    11 Retweets 14 Gefällt mir
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  5. hat retweetet
    14. Dez.

    Really cool tool for real-time scaffolding and awsome visualization released by . Well done!

    24 Retweets 50 Gefällt mir
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  6. hat retweetet
    13. Dez.

    Senior postdoc in population genomics of Anopheles mosquitoes. We’re sequencing 10,000 mosquitoes a year so no shortage of data. Infer and model migration surfaces, seasonal dynamics, impact of mosquito control, insecticide resistance outbreaks, gene drive

    1 Antwort 40 Retweets 37 Gefällt mir
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  7. hat retweetet
    13. Dez.

    Flappie vs. Albacore via Counterr -- examining basecallers for homopolymers and substitutions

    3 Antworten 25 Retweets 47 Gefällt mir
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  8. 12. Dez.

    Exploration of the cattle rumen microbiome with PacBio, Illumina, and Hi-C. Comparison of the techs and assignment of virus and antimicrobial resistance genes to microbial hosts. New work w/ Derek Bickhart &

    31 Retweets 47 Gefällt mir
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  9. 12. Dez.

    "A chromosome-scale assembly of the major African malaria vector Anopheles funestus" w/ & Nora Besansky. Another mosquito genome improved w/ PacBio & Hi-C, but better methods for assembling heterozygous insect genomes still needed

    20 Retweets 36 Gefällt mir
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  10. hat retweetet
    10. Dez.

    We're looking for postdocs! Get in touch if you're interested in systems biology and genome engineering, or if you know someone who is:

    29 Retweets 19 Gefällt mir
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  11. hat retweetet
    7. Dez.

    Time to start truly finishing animal genomes! Most people don't know that not a single animal genome is finished, including the human genome. We now have the tech to do it s/o

    2 Antworten 64 Retweets 139 Gefällt mir
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  12. hat retweetet
    7. Dez.

    Department of Biomedical Informatics at Harvard Medical School (my academic department) is looking for an Assistant Professor. Join us!

    42 Retweets 43 Gefällt mir
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  13. hat retweetet
    5. Dez.

    I am formally looking for a few postdocs who would like to work with me on developing advanced computational algorithms. Please see the job listing for details.

    We're hiring! The Heng Li lab at / invites applications for a postdoctoral research fellow in bioinformatics and computational biology.
    6 Antworten 217 Retweets 200 Gefällt mir
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  14. hat retweetet
    3. Dez.

    From technical missteps to ethical blunders, here's a list of 15 worrying things about the increasingly farcical CRISPR baby scandal.

    46 Antworten 1.035 Retweets 1.284 Gefällt mir
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  15. hat retweetet
    4. Dez.

    Our preprint introducing >300 Gbp sequencing of microbial community standards is up! Of interest to anyone looking for juicy real data to put tools to the test. Amazing lab work & nice first paper with lab

    4 Antworten 86 Retweets 174 Gefällt mir
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  16. 3. Dez.

    "Deep repeat resolution—the assembly of the Drosophila Histone Complex" Neural Nets for assembling tandem repeats in Drosophila

    17 Retweets 25 Gefällt mir
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  17. hat retweetet
    2. Dez.

    Great tool! It has quickly become a corner stone in my bioinformatic toolkit.

    Our latest: Are microbial species actually a thing? FastANI gives us a peek. More great work from . Great to see this published!
    6 Retweets 37 Gefällt mir
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  18. hat retweetet
    30. Nov.
    Antwort an

    Very useful tool! Used this in parallel with another method to obtain ANI and showed a good correlation, while definitely putting the 'fast' in fastANI

    2 Retweets 3 Gefällt mir
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  19. 30. Nov.

    Our latest: Are microbial species actually a thing? FastANI gives us a peek. More great work from . Great to see this published!

    4 Antworten 169 Retweets 293 Gefällt mir
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  20. 30. Nov.

    Great to see more journals moving towards transparency of the review process

    Exciting news: from Jan 1st, we will be moving to transparent peer review (where referee reports are published anonymously alongside the published article)
    1 Antwort 3 Retweets 15 Gefällt mir
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