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Rinne Adam Phillippy Atweetáil
Thank you
@NatureBiotech for the editorial article on our#vertebrategenomesproject: 'The#VGP is the clearest indicator yet that the era of high-quality reference genomes is upon us.'@Genome10K@erichjarvishttps://twitter.com/NatureBiotech/status/1070730436127670278 …Go raibh maith agat. Bainfidh Twitter úsáid as seo chun d'amlíne a fheabhsú. CealaighCealaigh -
Rinne Adam Phillippy Atweetáil
A High-Quality De Novo Genome Assembly from a Single Mosquito using PacBio Sequencing http://biorxiv.org/cgi/content/short/499954v1 …
#bioRxivGo raibh maith agat. Bainfidh Twitter úsáid as seo chun d'amlíne a fheabhsú. CealaighCealaigh -
Rinne Adam Phillippy Atweetáil
It's out! Check out my first first author paper "Long-read sequence and assembly of segmental duplications" out today at
@naturemethods (https://www.nature.com/articles/s41592-018-0236-3 …)! Many thanks to everyone who made it happen: Philip Dishuck, Tonia Brown,@EichlerEE,@mjpchaisson, and more!Go raibh maith agat. Bainfidh Twitter úsáid as seo chun d'amlíne a fheabhsú. CealaighCealaigh -
Rinne Adam Phillippy AtweetáilGo raibh maith agat. Bainfidh Twitter úsáid as seo chun d'amlíne a fheabhsú. CealaighCealaigh
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Rinne Adam Phillippy Atweetáil
Really cool tool for real-time scaffolding and awsome visualization released by
@shoangnguyen https://github.com/hsnguyen/assembly …. Well done!Go raibh maith agat. Bainfidh Twitter úsáid as seo chun d'amlíne a fheabhsú. CealaighCealaigh -
Rinne Adam Phillippy Atweetáil
Senior postdoc in population genomics of Anopheles mosquitoes. We’re sequencing 10,000 mosquitoes a year so no shortage of data. Infer and model migration surfaces, seasonal dynamics, impact of mosquito control, insecticide resistance outbreaks, gene drive https://www.recruit.ox.ac.uk/pls/hrisliverecruit/erq_jobspec_details_form.jobspec?p_id=138607 …
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Rinne Adam Phillippy Atweetáil
Flappie vs. Albacore via Counterr -- examining
@nanopore basecallers for homopolymers and substitutions http://omicsomics.blogspot.com/2018/12/flappie-vs-albacore-via-counterr.html …Go raibh maith agat. Bainfidh Twitter úsáid as seo chun d'amlíne a fheabhsú. CealaighCealaigh -
Exploration of the cattle rumen microbiome with PacBio, Illumina, and Hi-C. Comparison of the techs and assignment of virus and antimicrobial resistance genes to microbial hosts. New work w/ Derek Bickhart
@BioMickWatson@sergekoren &@tplsmith https://www.biorxiv.org/content/early/2018/12/09/491175 …pic.twitter.com/XMWfSPfgA3
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"A chromosome-scale assembly of the major African malaria vector Anopheles funestus" w/
@jayghurye@sergekoren & Nora Besansky. Another mosquito genome improved w/ PacBio & Hi-C, but better methods for assembling heterozygous insect genomes still neededhttps://www.biorxiv.org/content/early/2018/12/10/492777 …Go raibh maith agat. Bainfidh Twitter úsáid as seo chun d'amlíne a fheabhsú. CealaighCealaigh -
Rinne Adam Phillippy Atweetáil
We're looking for postdocs! Get in touch if you're interested in systems biology and genome engineering, or if you know someone who is: https://www.training.nih.gov/postdoc_jobs_nih/view/_31/6032/Systems_Biology_and_Genome_Engineering …
Go raibh maith agat. Bainfidh Twitter úsáid as seo chun d'amlíne a fheabhsú. CealaighCealaigh -
Rinne Adam Phillippy Atweetáil
Time to start truly finishing animal genomes! Most people don't know that not a single animal genome is finished, including the human genome. We now have the tech to do it s/o
@aphillippyhttps://www.nature.com/articles/nbt.4318 …Go raibh maith agat. Bainfidh Twitter úsáid as seo chun d'amlíne a fheabhsú. CealaighCealaigh -
Rinne Adam Phillippy Atweetáil
Department of Biomedical Informatics at Harvard Medical School (my academic department) is looking for an Assistant Professor. Join us!https://academicpositions.harvard.edu/postings/8667
Go raibh maith agat. Bainfidh Twitter úsáid as seo chun d'amlíne a fheabhsú. CealaighCealaigh -
Rinne Adam Phillippy Atweetáil
I am formally looking for a few postdocs who would like to work with me on developing advanced computational algorithms. Please see the job listing for details.https://twitter.com/dfcidatascience/status/1070392969780518918 …
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Rinne Adam Phillippy Atweetáil
From technical missteps to ethical blunders, here's a list of 15 worrying things about the increasingly farcical CRISPR baby scandal.https://www.theatlantic.com/science/archive/2018/12/15-worrying-things-about-crispr-babies-scandal/577234/ …
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Rinne Adam Phillippy Atweetáil
Our preprint introducing >300 Gbp
@nanopore sequencing of@ZymoResearch microbial community standards is up! Of interest to anyone looking for juicy real data to put tools to the test. Amazing lab work@Scalene & nice first paper with@pathogenomenick labhttps://www.biorxiv.org/content/early/2018/12/04/487033 …Go raibh maith agat. Bainfidh Twitter úsáid as seo chun d'amlíne a fheabhsú. CealaighCealaigh -
"Deep repeat resolution—the assembly of the Drosophila Histone Complex" Neural Nets for assembling tandem repeats in Drosophilahttps://academic.oup.com/nar/advance-article/doi/10.1093/nar/gky1194/5208348 …
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Rinne Adam Phillippy Atweetáil
Great tool! It has quickly become a corner stone in my bioinformatic toolkit.https://twitter.com/aphillippy/status/1068497439617966080 …
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Rinne Adam Phillippy Atweetáil
Very useful tool! Used this in parallel with another method to obtain ANI and showed a good correlation, while definitely putting the 'fast' in fastANI
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Our latest: Are microbial species actually a thing? FastANI gives us a peek. More great work from
@chirgjain. Great to see this published!https://www.nature.com/articles/s41467-018-07641-9 …Go raibh maith agat. Bainfidh Twitter úsáid as seo chun d'amlíne a fheabhsú. CealaighCealaigh -
Great to see more journals moving towards transparency of the review processhttps://twitter.com/GenomeBiology/status/1068461533770993664 …
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