Aaron Quinlan

@aaronquinlan

Associate Prof of Human Genetics and Biomedical Informatics . Co-founder of ()

Univ. of Utah
Gått med maj 2011

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  1. för 13 timmar sedan

    I had time to think today and actually came up with a new idea. I may do this tomorrow as well.

    Ångra
  2. Retweetade
    för 16 timmar sedan

    I wrapped variantkey () in nim here: allows en/de-coding chrom,pos,ref,alt as uint64. I'll have a lib that makes use of this available for use soon.

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  3. Retweetade
    18 dec.

    Our HATCHeT algorithm for identifying copy number aberrations and whole-genome duplications in multi-sample tumor sequencing data is now online

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  4. Retweetade
    18 dec.

    Our paper is officially out! How muscle regulates fertility in male (worms).

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  5. Retweetade
    17 dec.
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  6. 17 dec.
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  7. Retweetade
    16 dec.
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  8. Retweetade
    16 dec.
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  9. 14 dec.

    I just went to for the first time in awhile. Got a 3.5 foot paper receipt (literally) for a bottle of aspirin. No joke. The Lorax disliked trees but CVS *hates* them. Never again.

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  10. Retweetade
    14 dec.

    Comparing two genetics associations at a locus (e.g. GWAS/eQTL)? Check out 's new tool RACER: Regional Association ComparER. Preprint: . R package:

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  11. Retweetade
    14 dec.

    Rewritten csvtk stats: summary stats of digital fields (supports groupby). Thanks for lots of feature suggestion on csvtk. csvtk does not try to do all things that can be done by R/Pandas, you can use it for fast investigation in shell.

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  12. Retweetade
    14 dec.

    Congrats , , Stephan + co on their contribution to the package! A great extension of the CWAS framework from the SSC-WGS paper earlier this year. Promoter variation does influence autism risk, but *very small* effects!

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  13. 13 dec.
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  14. Retweetade
    13 dec.

    Our preprint for svtools, the Hall Lab's suite of python utilities for making SV callsets, is finally out. Built off of excellent work from Haley Abel, , , Niel Das, , and .

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  15. 13 dec.
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  16. Retweetade
    10 dec.

    Acquired HER2 mutations in ER+ metastatic breast cancer confer resistance to estrogen receptor–directed therapies (Nayar et al.)

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  17. 13 dec.

    I picked up some postcards of British propaganda during WWII. This one is the best.

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  18. Retweetade
    12 dec.

    Searching the well lit regions of the genome for lurking variation.

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  19. Retweetade
    12 dec.

    Established PIs - I don’t know if you know this, but it makes such a difference when you take the time to encourage your junior colleagues. Building a lab is slow work, feedback is sparse, metrics hard to come by, and it can be easy to worry you’re lost in the weeds.

    Visa denna tråd
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  20. 11 dec.

    When will VR technology allow me to be a part of books I read? All other applications are trash in comparison.

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