Rob Patro

@nomad421

Assistant Professor @ Stony Brook University. I ♥ science & have a serious interest in (compiled, statically-typed) programming languages! Views are my own.

robpatro.com
Joined August 2008
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  1. Retweeted
    2 hours ago

    Exploring the amazing work of colleagues at : the heterogeneity of the plasma cells in multiple myeloma. This dataset is now indexed in () for easy and free access by the scientific community!

    4 retweets 6 likes
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  2. Retweeted
    10 hours ago

    Thank you Prof. , for advising, supporting, and having faith in me on the creative dissertation projects! I owe my gratitude to all my teachers and friends ! Thank you all!

    2 retweets 12 likes
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  3. Retweeted
    22 hours ago

    Audible crashed while I was listening to a chapter on software reliability (in Life 3.0). It didn't repro, but I imagined how badass it would have been if they had managed to intentionally include a poison codec packet in the audio file.

    16 replies 75 retweets 750 likes
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  4. Retweeted
    Dec 18

    Congrats !

    At this moment is defending his PhD thesis. Most likely one of the very first worldwide to include PromethION. Congratulations!
    Show this thread
    1 retweet 10 likes
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  5. Retweeted
    Dec 18

    Very happy to announce that next year I will move to Canberra to be an EMBL PI at the in The Australian National University

    20 replies 13 retweets 131 likes
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  6. Retweeted
    Dec 18

    Our HATCHeT algorithm for identifying copy number aberrations and whole-genome duplications in multi-sample tumor sequencing data is now online

    3 replies 34 retweets 54 likes
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  7. Retweeted
    Dec 18

    New preprint! "Microbial contamination in the genome of the domesticated olive"

    6 retweets 12 likes
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  8. Dec 18

    No! No no no …. this name collision is *not* OK.

    BLAST : a short computerized test to measure the ability to stay on task. Normative behavioral data and detailed cortical dynamics.
    7 replies 23 retweets 88 likes
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  9. Dec 18

    Like mother, like son :)

    1 reply 22 likes
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  10. Retweeted
    Dec 18

    EPIC-DREM is integrated into TEPIC 2 and supports many different species.

    1 reply 8 retweets 12 likes
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  11. Retweeted
    Dec 11

    New postdoc position in our lab. Will focus on high-throughput sequencing data for pathogen identification, immune response, and predictive public health analysis. Position is funded by a collaboration with and Steven Schiff

    58 retweets 50 likes
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  12. Retweeted
    Dec 17

    Accurate quantification of copy-number aberrations and whole-genome duplications in multi-sample tumor sequencing data

    6 retweets 13 likes
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  13. Retweeted
    Dec 17

    Our latest paper

    3 replies 48 retweets 133 likes
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  14. Retweeted
    Dec 17

    FORGe - a new method from , Chen and , for optimizing numbers of variants to include in graph genomes, balancing coverage with computational requirements

    16 retweets 25 likes
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  15. Retweeted
    Dec 16

    Another year of HitSeq, please submit your papers until January 28th.

    7 retweets 3 likes
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  16. Retweeted
    Dec 15

    Real-time measurement of protein–protein interactions at single-molecule resolution using a biological nanopore:

    56 retweets 100 likes
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  17. Retweeted
    Dec 14

    Yo this is fucked up

    “Papers that do not contain original or substantive research, including undergraduate research...” Yo just said undergrad research, as a general category, is not original or substantive. Is this a syntax error, or are they bona fide assholes?
    Show this thread
    1 reply 2 retweets 22 likes
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  18. Retweeted
    Dec 14

    Thursday at 9 a.m., will present on "Clonal Heterogeneity and Evolution in Primary Tumors and Metastases". PMCRT 4-204, 101 College St, Toronto. Should be very interesting!

    3 retweets 15 likes
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  19. Retweeted
    Dec 13

    My first first-author paper from my PhD is out, and it won the prize. Thank you! Re-assembling 678 transcriptomes was a fun & challenging project. Big thanks to .

    Reprocessing the Microbial Genomic Goldmine. New work just out from & winner of our Prize
    7 replies 22 retweets 63 likes
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  20. Retweeted
    Dec 12

    Exploration of the cattle rumen microbiome with PacBio, Illumina, and Hi-C. Comparison of the techs and assignment of virus and antimicrobial resistance genes to microbial hosts. New work w/ Derek Bickhart &

    31 retweets 47 likes
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