Bioconductor

@Bioconductor

Roswell Park Cancer Institute
bioconductor.org
Iscrizione a novembre 2011
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  1. 12 dic

    Bioconductor pkgs are just R pkgs; they don't have any special properties. The issue comes from GOSemSim::load_OrgDb, which says `require(...)`, attaching the org.db & other pkgs to the search path; this is definitely poor form, but does not cause an R CMD check warning.

    In risposta a @David_McGaughey e @Bioconductor
    Another issue is that even if I load `clusterProfiler::bitr` this function still loads AnnotationDbi into the namespace….is that allowed behavior for libraries?
    1 risposta 1 Retweet 2 Mi piace
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  2. 12 dic

    Use them fully resolved `AnnotationDbi::select()` / `dplyr::select()` or use the conflicted package to die earlier.

    Isn’t there someway to handle and each REALLY wanting `select` ? This issue keeps murdering my scripts/r notebooks.
    2 risposte 2 Retweet 7 Mi piace
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  3. ha ritwittato
    7 dic

    We're hiring! Want to help develop the platform? Check out our Research Scientist position with .

    9 Retweet 6 Mi piace
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  4. ha ritwittato
    6 dic

    Registration for in NYC is now open, and several invited speakers announced (, , , , Lihua Julie Zhu). Travel scholarships available. FYI to all at ...

    1 risposta 33 Retweet 31 Mi piace
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  5. 30 nov

    really good & compassionate advice

    Since we're running a bit short of time at we'll skip my talk, but here are my slides on 'Getting help and helping others (including future you)' when using &
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    8 Retweet 13 Mi piace
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  6. ha ritwittato
    26 nov

    Registration now open for the EMBL Course: Introduction to Bioinformatics with R and Bioconductor, a beginner level course that provides a basic training in generic statistical bioinformatics data analysis, 1 - 4 Apr

    3 Retweet 8 Mi piace
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  7. ha ritwittato
    20 nov

    My group is hiring a software engineer talented in and familiar with . We're committed to and science.

    1 risposta 58 Retweet 62 Mi piace
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  8. ha ritwittato
    9 nov

    Some recent development branch updates to the package allow both piping (%>%) and formula-free (no ~) filtering exposing the metadata like to -like filtering (and select).

    3 risposte 16 Retweet 29 Mi piace
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  9. ha ritwittato
    8 nov

    The software list is up at A tweet with hashtag and the CRAN, GitHub, BitBucket, or Bioconductor URL will get your software added. Thanks to for helping set this up last year for the meeting.

    13 risposte 72 Retweet 132 Mi piace
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  10. 6 nov

    / Software ecosystem architect position, Dana Farber Cancer Institute

    7 Retweet 2 Mi piace
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  11. 31 ott

    Trick or Treat?! Bioc 3.8 is now available!

    28 Retweet 48 Mi piace
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  12. ha ritwittato
    23 ott

    I'm looking for a Research software engineer/bioinformatician to work on and omics.

    33 Retweet 22 Mi piace
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  13. ha ritwittato
    17 ott

    Our approach to producing Workshop compendium for , coordinating 17 authors, 15 contributions to produce 388 page book and matching computational resources in 10 weeks.

    2 risposte 19 Retweet 44 Mi piace
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  14. ha ritwittato
    15 ott

    Just finished to prepare 2 courses: 1) core packages for data analysis 2) and data analysis See Will teach them in the next 2 days M2 bioinfo

    6 Retweet 24 Mi piace
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  15. ha ritwittato
    15 ott

    Our team will work to make the data and compute resources in the AnVIL available to as wide a community of researchers as possible. Drawing on our experience implementing and we will build a variety of entry points to the AnVIL for different users...

    1 risposta 3 Retweet 6 Mi piace
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  16. ha ritwittato
    16 ott

    Awesome use of 's Tabula Muris data - a package to load the data! Thanks !!

    1 risposta 10 Retweet 22 Mi piace
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  17. ha ritwittato
    12 ott

    We're hiring! Want to help develop the platform? Check out our Research Scientist position with .

    1 risposta 22 Retweet 17 Mi piace
    Annulla
  18. ha ritwittato
    4 set

    Registration is now open for European Developer meeting Dec 6-7 at TUM in Munich. Featuring , , Bernd Bischl and more .. Abstract deadline: Oct 10 Details:

    21 Retweet 20 Mi piace
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  19. ha ritwittato
    20 ago

    Our group is hiring a Bioinformatics Analyst. Live in , work on , , and cutting edge CAR T cell and research.

    1 risposta 23 Retweet 21 Mi piace
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  20. ha ritwittato
    29 lug

    Please RT: We are hiring a (min. 2 year) postdoc. Live in Zurich! Analyze single-cell data of various flavours .. develop (and benchmark) statistical / computational tools! Details to follow soon.

    5 risposte 215 Retweet 112 Mi piace
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