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Aaron Quinlan
@
aaronquinlan
Univ. of Utah
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Associate Prof of Human Genetics and Biomedical Informatics @UU. Co-founder of @Base2G (base2genomics.com)
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11,951
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849
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9,229
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Aaron Quinlan
@aaronquinlan
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12 ಗಂ. |
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I had time to think today and actually came up with a new idea. I may do this tomorrow as well.
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| Aaron Quinlan ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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brent pedersen
@brent_p
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16 ಗಂ. |
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I wrapped variantkey (biorxiv.org/content/early/…) in nim here: github.com/brentp/variant…
allows en/de-coding chrom,pos,ref,alt as uint64. I'll have a lib that makes use of this available for use soon.
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| Aaron Quinlan ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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Ben Raphael
@benjraphael
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ಡಿಸೆಂ 18 |
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Our HATCHeT algorithm for identifying copy number aberrations and whole-genome duplications in multi-sample tumor sequencing data is now online biorxiv.org/content/early/… pic.twitter.com/vYYuJAWvXy
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| Aaron Quinlan ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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Gillian Stanfield
@stanfiend
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ಡಿಸೆಂ 18 |
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Our paper is officially out! How muscle regulates fertility in male (worms). @Daniela_RChavez twitter.com/dev_journal/st…
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Aaron Quinlan
@aaronquinlan
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ಡಿಸೆಂ 18 |
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Ensembl BioMart. Explore the attributes available under "Features" and "Structures".
uswest.ensembl.org/biomart/martvi… pic.twitter.com/RCBS3ioJm3
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Aaron Quinlan
@aaronquinlan
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ಡಿಸೆಂ 18 |
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Looking forward to reading this over the break. Congratulations
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| Aaron Quinlan ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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Adam Siepel
@asiepel
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ಡಿಸೆಂ 17 |
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Our latest paper nature.com/articles/s4158…
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Aaron Quinlan
@aaronquinlan
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ಡಿಸೆಂ 17 |
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The Yoda of Silicon Valley (Donald Knuth):
nytimes.com/2018/12/17/sci…
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| Aaron Quinlan ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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Nate Krah
@N8Krah
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ಡಿಸೆಂ 16 |
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So Utah... pic.twitter.com/yHl0mZhg3B
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| Aaron Quinlan ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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James Boocock
@theboocock
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ಡಿಸೆಂ 16 |
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Looking at you @elistahl_person twitter.com/vagar112/statu…
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Aaron Quinlan
@aaronquinlan
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ಡಿಸೆಂ 14 |
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I just went to @cvspharmacy for the first time in awhile. Got a 3.5 foot paper receipt (literally) for a bottle of aspirin. No joke. The Lorax disliked trees but CVS *hates* them. Never again.
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Aaron Quinlan
@aaronquinlan
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ಡಿಸೆಂ 14 |
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Congrats to both of you!
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| Aaron Quinlan ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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Charles Farber
@cr_farber
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ಡಿಸೆಂ 14 |
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Comparing two genetics associations at a locus (e.g. GWAS/eQTL)? Check out @oliviasabik's new tool RACER: Regional Association ComparER. Preprint: biorxiv.org/content/early/…. R package: github.com/oliviasabik/RA… pic.twitter.com/z4otkcpYAA
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| Aaron Quinlan ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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Wei Shen
@shenwei356
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ಡಿಸೆಂ 14 |
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Rewritten csvtk stats: summary stats of digital fields (supports groupby). Thanks @AlbertVilella for lots of feature suggestion on csvtk.
csvtk does not try to do all things that can be done by R/Pandas, you can use it for fast investigation in shell. github.com/shenwei356/csv…
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| Aaron Quinlan ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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Ryan L Collins
@RyanLCollins13
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ಡಿಸೆಂ 14 |
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Congrats @joonomics, @DonnaWerling, Stephan + co on their contribution to the #PsychENCODE package! A great extension of the CWAS framework from the SSC-WGS paper earlier this year. Promoter variation does influence autism risk, but *very small* effects! science.sciencemag.org/content/362/64…
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Aaron Quinlan
@aaronquinlan
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ಡಿಸೆಂ 14 |
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I am so bummed to have missed this.
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Aaron Quinlan
@aaronquinlan
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ಡಿಸೆಂ 13 |
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These are excellent! twitter.com/uofu3i/status/…
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| Aaron Quinlan ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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Dave Larson
@Ernfrid77
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ಡಿಸೆಂ 13 |
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Our preprint for svtools, the Hall Lab's suite of python utilities for making SV callsets, is finally out. Built off of excellent work from Haley Abel, @colbychiang, @AbhiBadveTweets, Niel Das, @gscjim, and @ryanlayer.
biorxiv.org/content/early/…
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Aaron Quinlan
@aaronquinlan
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ಡಿಸೆಂ 13 |
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| Aaron Quinlan ಮರುಟ್ವೀಟಿಸಿದ್ದಾರೆ | ||
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Nature Genetics
@NatureGenet
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ಡಿಸೆಂ 10 |
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Acquired HER2 mutations in ER+ metastatic breast cancer confer resistance to estrogen receptor–directed therapies (Nayar et al.) go.nature.com/2QoZ4bB pic.twitter.com/6urNRPwSAC
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