Lior Pachter

@lpachter

Bren Professor of Computational Biology at Caltech. Blog at .

ಏಪ್ರಿಲ್ 2009 ಸಮಯದಲ್ಲಿ ಸೇರಿದ್ದಾರೆ

ಮಾಧ್ಯಮ

  1. ಡಿಸೆಂ 18
  2. ನವೆಂ 28

    Jiankui He just said of CCR5 knockouts in mice: "In common behavior assessment, showed no differences." His slide showed the opposite. The effect size on "novel object investigation" ~2x and the null hypothesis is rejected at p=0.08. The variance on "maze" is also different.

  3. ನವೆಂ 21

    The histograms below show how many barcodes (y-axis) were observed for a given number of genes detected (x-axis). 8/12

    ಈ ಥ್ರೆಡ್ ತೋರಿಸಿ
  4. ನವೆಂ 19
  5. ನವೆಂ 12
    ಈ ಥ್ರೆಡ್ ತೋರಿಸಿ
  6. ನವೆಂ 12
    ಈ ಥ್ರೆಡ್ ತೋರಿಸಿ
  7. ನವೆಂ 11

    Interesting to look at the US congress data posted: The finite differences reveal two singular events (which I plotted in red). The 1992 election (after Thomas) and 2018 election (after Kavanaugh/Trump). No decrease since 1978 elections.

  8. ನವೆಂ 9

    A question for (cc ). The website says that bioRxiv is intended "for new research" and not reviews. How then is legitimate when its main purpose is to review a timeline of events related to a spat between authors?

    ಈ ಥ್ರೆಡ್ ತೋರಿಸಿ
  9. ನವೆಂ 8

    The Nobel bar today.

  10. ನವೆಂ 8
    ಅವರಿಗೆ ಪ್ರತಿಕ್ರಿಯಿಸುತ್ತಿದ್ದಾರೆ
  11. ನವೆಂ 8
    ಅವರಿಗೆ ಪ್ರತಿಕ್ರಿಯಿಸುತ್ತಿದ್ದಾರೆ

    The issue is not about splicing per se, but about ambiguously mapping reads. These can be an issue in bacterial RNAseq as well.

  12. ನವೆಂ 8

    I've been talking about why it's a bad idea for years: There have also been many better alternatives availble for years.

    ಈ ಥ್ರೆಡ್ ತೋರಿಸಿ
  13. ನವೆಂ 5
  14. ನವೆಂ 3

    A comparison of RSEM and kallisto for reproducible cancer RNA-seq analysis with workflow design details by and .

  15. ನವೆಂ 3
  16. ನವೆಂ 1

    There are many t-SNE and UMAP plots being shown at the meeting. The community has come to believe that these visualizations are heuristic. However this paper by and Steinerberger reveals a theorem underlying t-SNE clusters.

    ಈ ಥ್ರೆಡ್ ತೋರಿಸಿ
  17. ಅಕ್ಟೋ 31
    ಅವರಿಗೆ ಪ್ರತಿಕ್ರಿಯಿಸುತ್ತಿದ್ದಾರೆ
  18. ಅಕ್ಟೋ 27
    ಅವರಿಗೆ ಪ್ರತಿಕ್ರಿಯಿಸುತ್ತಿದ್ದಾರೆ
  19. ಅಕ್ಟೋ 25

    The Berlin Institute for Molecular Systems Biology grand opening symposium starts today. See for details. The meeting is being live-streamed (subject to speaker approval) at (h/t ) Congratulations !

  20. ಅಕ್ಟೋ 21
    ಅವರಿಗೆ ಪ್ರತಿಕ್ರಿಯಿಸುತ್ತಿದ್ದಾರೆ

    1. The numbers seem to disagree with a plot in the report. bottom 50% captured 9% of growth in one, 12% in the other.

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