mfinder

Network motifs detection tool

  • Manual

  • Software: mfinder1.2.zip
  • Source code for Windows

    • mfinder1.2_source.zip
  • Source code for Linux mfinder1.2_unix.tar.gz
    Linux version: run 'tar -xvzf mfinder1.2_unix.tar.gz', 'cd mfinder1.2', and then 'make'
  • Motif dictionary
  • Supplamentary materials - Milo et al. Science 2002

    • We also recommend other excellent tools:
    (support also analysis of networks with multiple-color nodes and edges)

  • FANMOD - a tool for fast network motifs detection (by S. Wernicke and F. Rasche)
  • MAVisto - motif analysis and visualisation tool
    (by F. Schreiber and H. Schwobbermeyer)
  • Wong E., Baur B., Quader S. and Huang C.
    Biological network motif detection: principles and practice
    Briefings in Bioinformatics (2011) PDF

mDraw

Network visualization tool

(mfinder and network motifs visualization tool)

network layouts gallery and application screenshoots
for questions and comments please contact [email protected]